This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DKCY.1

Display Name: Turkey/LOC_001DKCY.1
O. Orkun, Z. Karaer, A. Cakmak & S. Nalbantoglu

Sample details

Collection date (upper bound)
2017-04-12
Earliest release date
2017-04-12
Collection country
Turkey
Isolate name
Orkun-Aky/Hap-216A

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-13 18:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Ankara University Veterinary Faculty, Department of Parasitology

INSDC

NCBI release date
2017-04-12
INSDC accession S

Host

Host taxon id
Host name scientific
Haemaphysalis parva

Alignment and QC metrics S

Length S
212
Total SNPs S
39
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
12.68%
Total stop codons S
0

Submission details

Submission ID
KX425614.1.S
Submitting group
Date submitted
2026-02-13 18:06:37 UTC
Date released
2026-02-13 18:10:43 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:G262A
  • S:A268C
  • S:G271A
  • S:T274C
  • S:T283C
  • S:G292A
  • S:C295T
  • S:A298T
  • S:T304C
  • S:C310T
  • S:A322G
  • S:A325G
  • S:A331G
  • S:A337G
  • S:A349G
  • S:G353T
  • S:T364C
  • S:G367A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
    • Deletions
    None
    Insertions
    None

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