This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001D15W.1

Display Name: Russia/LOC_001D15W.1/2024-07-24
E. Sapega, L. Butakova & O. Trotsenko

Sample details

Collection date
2024-07-24
Collection date (lower bound)
2024-07-24
Collection date (upper bound)
2024-07-24
Earliest release date
2025-02-11
Collection country
Russia
Isolate name
179PRI/RUS/2024

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-13 08:44insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Khabarovsk Research Institute of Epidemiology and Microbiology, Far Eastern Regional Research and Methodological Center for the Study of Enterovirus Infections

INSDC

NCBI release date
2025-02-11
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics EV-A71

Length EV-A71
324
Total SNPs EV-A71
56
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
4.37%

Submission details

Submission ID
PQ786034.1.EV-A71
Submitting group
Date submitted
2025-10-13 08:44:32 UTC
Date released
2025-10-13 09:38:25 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2587T
  • C2588G
  • A2591G
  • C2594G
  • T2600A
  • G2603A
  • G2606A
  • G2633A
  • T2636A
  • G2639A
  • T2648C
  • C2651T
  • T2657C
  • A2669G
  • C2672T
  • C2675T
  • C2690T
  • C2693T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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