This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001C322.1

Kenya/LOC_001C322.1/2022-02-09
J. U. Oguzie

University of Texas Medical Branch, Internal Medicine

Sample details

Collection date
2022-02-09
Earliest release date
2025-07-07
Sampling location
Kenya
Isolate name
W172

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 16:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-07-07
NCBI update date
2025-07-07
INSDC accession

Host

Host

Submission details

Submission ID
PV855232.1
Submitting group
Date submitted
2026-03-05 16:08:27 UTC
Date released
2026-03-05 16:24:00 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
54
Length
351 (4.74%)
Variant
False

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T2579G
  • C2585A
  • C2588G
  • A2591G
  • C2594T
  • T2600A
  • G2603A
  • G2606A
  • T2636A
  • C2651T
  • C2660T
  • A2669G
  • C2675T
  • T2684C
  • C2702A
  • G2711A
  • T2720C
  • T2723C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
Deletions
N/A
Insertions
N/A

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