This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001BN87.1

Taiwan/LOC_001BN87.1/2008
C.-S. Chang, C.-C. Liao, A.-T. Liou, Y.-C. Chou, C.-S. Suen, M.-J. Hwang, C. Shih & C.-C. Chun-Che Liao

Kaohsiung Medical University, Graduate Institute of Medicine

Sample details

Collection date
2008
Earliest release date
2020-11-30
Sampling location
Taiwan
Isolate name
No.7

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-10 12:22insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-11-30
NCBI update date
2020-11-30
INSDC accession

Submission details

Submission ID
MT348340.1
Submitting group
Date submitted
2026-06-10 12:21:58 UTC
Date released
2026-06-10 12:29:16 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
159
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2441A
  • C2444T
  • A2447G
  • T2462C
  • T2480C
  • A2491G
  • C2495A
  • C2503A
  • A2504G
  • T2507C
  • T2508C
  • A2510T
  • T2513G
  • C2525A
  • C2527A
  • G2529A
  • C2534A
  • A2537G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K43E
  • VP1:A58T
  • VP1:E92G
  • VP1:K98E
  • VP1:R145Q
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S184T
  • VP1:E244K
  • VP1:S246P
  • VP1:I249V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue