This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001B87P.1

China/LOC_001B87P.1/2024
Y. Y. Zhou, X. J. Zhang, J. Y. Lin, Y. Zhu, R. J. Lu, W. J. Tan & J. Shen

Children's Hospital of Fudan University, Infectious Disease Department

Sample details

Collection date
2024
Earliest release date
2025-01-11
Sampling location
China (Shanghai)
Isolate name
SH2024-456

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-21 21:26insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-01-11
NCBI update date
2025-01-11
INSDC accession

Host

Host

Submission details

Submission ID
PQ826418.1
Submitting group
Date submitted
2026-03-21 21:26:29 UTC
Date released
2026-03-21 21:44:49 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
168
Length
1144 (15.5%)
Variant
False

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions

  • C2238T
  • T2244C
  • T2247C
  • A2259C
  • C2262T
  • C2280T
  • G2298A
  • T2304A
  • T2307C
  • T2310A
  • T2316C
  • A2319G
  • A2325G
  • C2346T
  • T2349C
  • T2359C
  • T2370C
  • T2373C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1I
  • VP1:N2E
  • VP1:V13I
  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95T
  • VP1:G97Q
  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:D144N
  • VP1:S145N
  • VP1:M148V
  • VP1:K168E
  • VP1:E169K
  • VP1:G178S
Deletions
N/A
Insertions
N/A

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