This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001AEKU.1

Philippines/LOC_001AEKU.1/2015
M. M. A. D. Jiao, L. N. G. Apostol & A. O. Tandoc

Research Institute for Tropical Medicine, Virology

Sample details

Collection date
2015
Earliest release date
2019-12-25
Sampling location
Philippines
Isolate name
NPEV15-03-069

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:42insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2019-12-25
NCBI update date
2019-12-25
INSDC accession

Host

Host

Submission details

Submission ID
MK977639.1
Submitting group
Date submitted
2026-05-09 06:42:20 UTC
Date released
2026-05-09 07:08:44 UTC

Clade

Clade EV-A71
C2-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
132
Length
780 (10.5%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • A2447G
  • C2468T
  • A2477G
  • T2480C
  • T2489C
  • A2491G
  • G2492A
  • C2503A
  • T2507C
  • T2508C
  • T2513A
  • C2519T
  • A2522G
  • C2527A
  • G2529A
  • C2534A
  • A2537G
  • G2540A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
Deletions
N/A
Insertions
N/A

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