This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0018K8G.1

Display Name: China/LOC_0018K8G.1/2018
H. Yu & Y. Zhou

Sample details

Collection date
2018
Collection date (lower bound)
2018-01-01
Collection date (upper bound)
2018-12-31
Earliest release date
2022-02-06
Collection country
China
Isolate name
7590Y1/China/Henan/EVA71/20170610

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-15 12:00insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Fudan University, School of Public Health, Fudan University, Key Laboratory of Public Health Safety, Ministry of Education

INSDC

NCBI release date
2022-02-06
NCBI update date
2022-02-06
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
449
Total SNPs
88
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
6.06%
Total stop codons
0

Submission details

Submission ID
MW028404.1
Submitting group
Date submitted
2025-12-15 11:59:58 UTC
Date released
2025-12-15 12:13:12 UTC

Clade

Clade EV-A71
C4

Genotype

Genotype
EV-A71

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C749T
  • C752G
  • G755A
  • C758G
  • C761T
  • A770C
  • C776T
  • G779T
  • G785A
  • T788C
  • C791A
  • G803T
  • A806G
  • C809T
  • C812T
  • T815C
  • T821C
  • A827C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions

    VP2

  • VP2:N45S
    • Deletions
    None
    Insertions
    None

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