This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0017V88.1

Turkey/LOC_0017V88.1/2023-06-03
Q. Lin, N. Elaldi, M. Yigit, B. Yildiz, R. Hewson, M. Lopez-Garcia, G. Lythe, A. N. Pektas, B. Koksal, T. N. Tasseten, A. Deniz, H. Bedir, Y. Cakir Kiymaz, Z. Vatansever, C. Molina-Paris & T. Leitner

Kafkas University, Department of Parasitology

Sample details

Collection date
2023-06-03
Earliest release date
2026-04-19
Sampling location
Turkey (Sivas, Zara, Akoren)
Isolate name
TRKAU/T-360-5/Zara/2023

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-07 12:26insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2026-04-19
INSDC accession M

Host

Host

Submission details

Submission ID
PX874956.1.M
Submitting group
Date submitted
2026-05-07 12:25:48 UTC
Date released
2026-05-07 13:21:37 UTC

Files

Annotations

Alignment and QC

Total SNPs M
1056
Total inserted nucs M
1
Total deleted nucs M
3
Length M
5338 (99.5%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • T40A
  • G50A
  • A51G
  • T67C
  • T68C
  • A69G
  • T71A
  • G76C
  • A80G
  • G84A
  • T86C
  • A88G
  • C92T
  • T94C
  • T100C
  • T102C
  • C103T
  • A108G
Deletions

M

327-329
Insertions

M

ins_5175:A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:M1T
  • GPC:I3T
  • GPC:S4L
  • GPC:M6V
  • GPC:Y7C
  • GPC:A8F
  • GPC:C11Y
  • GPC:C15L
  • GPC:L17R
  • GPC:E19G
  • GPC:T20A
  • GPC:S23Q
  • GPC:H24S
  • GPC:E26A
  • GPC:R28E
  • GPC:K31G
  • GPC:D33S
  • GPC:M35T
Deletions

GPC

GPC:90
Insertions
N/A

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