This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000YPTT.1

Malaysia/LOC_000YPTT.1/2006-07-06
Y. F. Chan, K. L. Wee, C. W. Chiam, C. S. Khor, S. Y. Chan, M. Z. Amalina W & I. C. Sam

University Malaya, Department of Medical Microbiology, Faculty of Medicine

Sample details

Collection date
2006-07-06
Earliest release date
2012-08-31
Sampling location
Malaysia
Isolate name
PM-35017-06

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:42insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2012-08-31
NCBI update date
2013-02-01
INSDC accession

Host

Host

Submission details

Submission ID
JN316155.1
Submitting group
Date submitted
2026-03-13 15:42:14 UTC
Date released
2026-03-13 15:48:08 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
34
Length
207 (2.79%)
Variant
False

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C752A
  • C758G
  • A762G
  • A764T
  • G767A
  • G779C
  • G785A
  • T788C
  • C791T
  • C794T
  • C800T
  • G803A
  • A818T
  • A827C
  • C830T
  • T836C
  • C839T
  • C848T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the U22521.1 reference

Substitutions

VP4

  • VP4:T7A
Deletions
N/A
Insertions
N/A

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