This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000YA4K.1

Display Name: Iraq/LOC_000YA4K.1/2023-09-15
R. R. Sulaiman & M. O. Babashekh

Sample details

Collection date
2023-09-15
Collection date (lower bound)
2023-09-15
Collection date (upper bound)
2023-09-15
Earliest release date
2024-04-27
Collection country
Iraq
Isolate name
CCHF/sharazoor/Iraq

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-22 14:40insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Sulaimani, College of Veterinary Medicine, Microbiology

INSDC

NCBI release date
2024-04-27
INSDC accession S

Host

Host taxon id
Host name scientific
Ixodoidea

Alignment and QC metrics S

Length S
516
Total SNPs S
71
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
30.86%

Submission details

Submission ID
OR713754.1.S
Submitting group
Date submitted
2025-10-22 14:40:13 UTC
Date released
2025-10-22 14:45:27 UTC

Lineage

Segment S Lineage
IV.2

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:T157C
  • S:C166T
  • S:G169A
  • S:T172C
  • S:C178A
  • S:T182C
  • S:C187T
  • S:G190A
  • S:G196A
  • S:A209G
  • S:C214T
  • S:C217T
  • S:G229A
  • S:C235T
  • S:T250A
  • S:G256A
  • S:G259A
  • S:A268T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:S52G
  • NP:D116E
  • NP:T124S
  • NP:G125N
  • NP:R177K
  • NP:H195R
  • NP:D199E
    • Deletions
    None
    Insertions
    None

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