This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000T7LZ.1

USA/IL060809CoEN/2006-08-09
G. Amore, L. Bertolotti, G. L. Hamer, U. D. Kitron, E. D. Walker, M. O. Ruiz, J. D. Brawn & T. L. Goldberg

Facolta' di Medicina Veterinaria, Produzioni Animali, Epidemiologia ed Ecologia

Sample details

Collection date
2006-08-09
Earliest release date
2010-04-07
Sampling location
USA (Illinois, Cook County)
Isolate name
IL060809CoEN

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2010-04-07
NCBI update date
2016-07-25
INSDC accession

Host

Host

Submission details

Submission ID
GU386808.1
Submitting group
Date submitted
2026-08-26 20:01:00 UTC
Date released
2026-08-26 20:03:50 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
7
Length
1575 (14.3%)
Amino Acid Mutations from founder clade
  • env:V65I
  • env:K93R
  • env:T126I
  • env:I159A
  • env:V232E
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G1159A
  • A1320G
  • T1442C
  • C1465T
  • T1661A
  • A2097G
  • C2466T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:V65I
  • env:V159A
  • env:L167F
  • env:V232E
Deletions
N/A
Insertions
N/A

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