This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDTF.1

Australia/2001281/2001-01-01
A. T. Pyke

Queensland Health Forensic and Scientific Services, Public Health Virology

Sample details

Collection date
2001
Earliest release date
2008-12-01
Sampling location
Australia (Mt Isa)
Isolate name
2001281

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-11 19:35insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2008-12-01
NCBI update date
2016-07-26
INSDC accession

Host

Host

Submission details

Submission ID
FJ375293.1
Submitting group
Date submitted
2026-05-11 19:34:32 UTC
Date released
2026-05-11 19:40:26 UTC

Lineage

Lineage
1B

Files

Annotations

Alignment and QC

Total SNPs
53
Total inserted nucs
1
Total deleted nucs
6
Length
372 (3.42%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A10263G
  • C10284T
  • G10287A
  • T10293C
  • G10309T
  • C10314A
  • C10317T
  • G10329A
  • C10338T
  • T10347C
  • C10351T
  • A10353G
  • A10371G
  • T10374A
  • C10386T
  • C10393T
  • G10398A
  • T10402G
Deletions

10478-10483
Insertions

ins_10463:T

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:A877S
Deletions
N/A
Insertions
N/A

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