This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDG4.1

Saudi_Arabia/LOC_000SDG4.1/2019
F. Zakham, A. E. Albalawi, A. D. Alanazi, P. Truong Nguyen, A. S. Alouffi, A. Alaoui, T. Sironen, T. Smura, O. Vapalahti & P. T. Truong Nguyen

University of Helsinki, Department of Virology

Sample details

Collection date
2019
Earliest release date
2021-09-06
Sampling location
Saudi Arabia (Al-Khurma)
Isolate name
KSA_2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-09-06
INSDC accession M

Submission details

Submission ID
MZ566479.1.M
Submitting group
Date submitted
2026-02-27 15:36:32 UTC
Date released
2026-02-27 15:42:53 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M
242
Length M
746 (13.9%)
Variant M
True

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • G1008C
  • A1009G
  • A1010T
  • C1013T
  • A1019G
  • T1025A
  • A1027T
  • C1031A
  • C1032T
  • T1034C
  • T1037C
  • T1046C
  • C1050T
  • A1051T
  • A1052G
  • G1061A
  • A1064T
  • G1065A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:E306R
  • GPC:I309M
  • GPC:E312V
  • GPC:H314Y
  • GPC:Q320L
  • GPC:G325T
  • GPC:L327P
  • GPC:S328D
  • GPC:T329V
  • GPC:E331A
  • GPC:S332P
  • GPC:T333S
  • GPC:P334R
  • GPC:G336K
  • GPC:L337A
  • GPC:P338S
  • GPC:A340N
  • GPC:E341Q
Deletions
N/A
Insertions
N/A

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