This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SB12.1

Turkey/LOC_000SB12.1/2017
M. O. Timurkan & H. Aydin

Ataturk University, Faculty of Veterinary Medicine, Departmet of Virology

Sample details

Collection date
2017
Earliest release date
2020-03-28
Sampling location
Turkey
Isolate name
TR/ATRVIN2013/OHE/29/M

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-03-28
INSDC accession M

Submission details

Submission ID
MT178322.1.M
Submitting group
Date submitted
2026-02-27 15:36:32 UTC
Date released
2026-02-27 15:41:50 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M
76
Length M
422 (7.86%)
Variant M
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C4671T
  • T4676C
  • A4678G
  • A4694T
  • C4697T
  • A4713G
  • A4730G
  • A4736G
  • T4742A
  • T4743C
  • G4745A
  • C4748T
  • A4751G
  • G4757A
  • T4763G
  • C4769T
  • A4778G
  • C4781T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:H1527Y
  • GPC:K1529R
  • GPC:E1534D
  • GPC:N1541D
  • GPC:S1564D
  • GPC:A1568T
  • GPC:K1569R
  • GPC:S1589G
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595F
  • GPC:M1597I
  • GPC:F1600L
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1652R
  • GPC:N1655S
  • GPC:K1661R
Deletions
N/A
Insertions
N/A

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