This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SB12.1

Display Name: China/LOC_000SB12.1/2010
W. Liu, C. He, L. J. Liu, H. Li, L. Zhang, M. T. Wei, H. Yang & W. C. Cao

Sample details

Collection date
2010
Collection date (lower bound)
2010-01-01
Collection date (upper bound)
2010-12-31
Earliest release date
2011-05-09
Collection country
China

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-15 14:05insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology

INSDC

NCBI release date
2011-05-09
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics EV-A71

Length EV-A71
891
Total SNPs EV-A71
161
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
12.03%

Submission details

Submission ID
HQ668325.1.EV-A71
Submitting group
Date submitted
2025-10-15 14:05:20 UTC
Date released
2025-10-15 14:17:00 UTC

Clade

Clade EV-A71
C4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2441A
  • C2444T
  • A2447G
  • G2459A
  • G2465A
  • C2468T
  • T2471C
  • T2483C
  • T2489C
  • A2491G
  • G2492A
  • C2501T
  • C2503A
  • A2504C
  • T2508C
  • T2513A
  • C2527A
  • A2528G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue