This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S6H8.1

Iran/LOC_000S6H8.1/2016-05-02
M. Fazlalipour, V. Baniasadi, T. Jalali, Y. Jamshidi, T. Mohammadi, S. Azad-Manjiri, S. Khakifirouz & M. Salehi-Vaziri

Tehran University of Medical Sciences, virology

Sample details

Collection date
2016-05-02
Earliest release date
2016-07-11
Sampling location
Iran
Isolate name
Iran-4841

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-07-11
INSDC accession S segment

Host

Host

Submission details

Submission ID
KX432283.1.S
Submitting group
Date submitted
2026-10-13 10:58:15 UTC
Date released
2026-10-13 11:00:00 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
43
Length S segment
366 (20.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G231A
  • G243A
  • A252C
  • T273C
  • G276A
  • G282C
  • T287C
  • G306T
  • A309G
  • T318G
  • A321G
  • G330A
  • G339A
  • C342T
  • G351A
  • T354A
  • T369C
  • A378G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:V83A
  • NP:D116E
  • NP:A124S
Deletions
N/A
Insertions
N/A

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