This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S69R.1

Display Name: Malaysia/LOC_000S69R.1
M. J. Cardosa & D. Perera

Sample details

Collection date (upper bound)
2006-01-31
Earliest release date
2006-01-31
Collection country
Malaysia
Collection subdivision level 1
Sarawak
Isolate name
SB12282-SAR-03

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-14 15:31insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Institute of Health and Community Medicine, Universiti Malaysia Sarawak

INSDC

NCBI release date
2006-01-31
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
891
Total SNPs EV-A71
166
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
12.03%

Submission details

Submission ID
AY905546.1.EV-A71
Submitting group
Date submitted
2025-11-14 15:30:38 UTC
Date released
2025-11-14 15:35:25 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2441A
  • C2444T
  • T2462C
  • T2480C
  • A2491G
  • C2495A
  • C2503A
  • A2504G
  • T2507C
  • T2508C
  • A2510G
  • T2513A
  • C2519T
  • C2525T
  • C2527A
  • G2529A
  • C2534A
  • A2537G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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