This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S69R.1

Namibia/LOC_000S69R.1/1987
M. Zivcec, L. Guerrero, C. Albarino, C. Spiropoulou, P. E. Rollin, T. G. Ksiazek, R. Swanepoel & S. T. Nichol

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
1987
Earliest release date
2017-09-06
Sampling location
Namibia
Isolate name
SPU134_87_813049_L

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-11 10:04insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-06
INSDC accession L segment

Host

Host

Submission details

Submission ID
MF511201.1.L
Submitting group
Date submitted
2026-06-11 10:04:03 UTC
Date released
2026-06-11 10:06:22 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
833
Total inserted nucs L segment
2
Length L segment
12095 (99.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • T16C
  • T49C
  • C63G
  • C64T
  • T65C
  • T70C
  • G93A
  • T106C
  • A124G
  • T157C
  • T160C
  • T163C
  • T202C
  • T229C
  • A238T
  • T254A
  • A262G
  • A268G
Deletions
N/A
Insertions

L segment

ins_11925:GC

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:S6N
  • RdRp:Y60N
  • RdRp:N206H
  • RdRp:K402R
  • RdRp:I505T
  • RdRp:S596G
  • RdRp:N647S
  • RdRp:L743P
  • RdRp:T757A
  • RdRp:R764K
  • RdRp:T767A
  • RdRp:R770K
  • RdRp:P774L
  • RdRp:N779S
  • RdRp:Q780K
  • RdRp:I783T
  • RdRp:E785D
  • RdRp:K809R
Deletions
N/A
Insertions
N/A

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