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LOC_000S69R.1
Download
Download FASTA
Download metadata TSV
Nigeria/LOC_000S69R.1/1965
A. N. Lukashev,
A. S. Klimentov,
S. E. Smirnova,
T. K. Dzagurova,
J. F. Drexler &
A. P. Gmyl
Chumakov Institute of Poliomyelitis and Viral Encephalitides
Sample details
Collection date
1965
Earliest release date
2016-12-07
Sampling location
Nigeria
Isolate name
IbAn7620
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-04-14 11:41
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2016-12-07
INSDC accession L segment
KX013450.1
INSDC accession M segment
KX013451.1
INSDC accession S segment
KX013452.1
Host
Host
domestic goat; goat; goats (Capra hircus)
Submission details
Submission ID
KX013450.1.L/KX013451.1.M/KX013452.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-14 11:41:47 UTC
Date released
2026-04-14 11:45:36 UTC
Clade & Lineage
Closest reference L segment
singleReference
Closest reference M segment
M (MH396653.1)
Closest reference S segment
S1 (OL774851.1)
Files
Annotations
LOC_000S69R.1.embl
Alignment and QC
Total SNPs L segment
968
Total inserted nucs L segment
32
Total deleted nucs L segment
6
Length L segment
12118 (99.9%)
Total SNPs S segment
239
Total deleted nucs S segment
2
Length S segment
1629 (90.3%)
Total SNPs M segment
680
Length M segment
5336 (97.8%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
L segment
G
32
A
A
35
G
A
36
T
T
52
C
C
59
T
T
60
A
C
63
G
C
64
T
T
65
C
T
70
A
C
82
T
A
92
G
G
93
A
C
148
T
T
160
C
T
163
C
G
175
A
T
181
C
Show more
M segment
A
30
T
A
57
G
A
60
G
G
65
A
G
72
A
T
78
C
T
81
C
C
82
T
G
103
A
G
106
A
G
113
A
T
115
C
T
116
C
C
118
T
T
122
C
G
124
A
A
127
G
C
133
T
Show more
S segment
T
16
A
C
31
G
G
34
A
A
45
G
C
81
T
A
83
G
A
84
G
A
98
T
A
102
G
G
107
A
A
108
G
A
114
G
T
117
A
G
120
A
C
123
T
C
126
T
C
138
T
T
139
C
Show more
Deletions
L segment
12066-12071
S segment
1570, 1585
Insertions
L segment
ins_11928:TG, ins_12108:TTCATTTATAATTGTTTTGGGGTGTGGGGG
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
M
6
I
GPC:
V
9
I
GPC:
F
10
L
GPC:
K
19
E
GPC:
N
21
Y
GPC:
P
23
S
GPC:
G
26
E
GPC:
E
28
R
GPC:
N
31
K
GPC:
H
33
D
GPC:
V
34
T
GPC:
D
39
G
GPC:
S
41
N
GPC:
Q
42
L
GPC:
P
44
S
GPC:
P
53
F
GPC:
V
54
I
GPC:
S
64
T
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NP
NP:
K
15
R
NP:
Y
20
F
NP:
G
23
E
NP:
Y
34
H
NP:
S
65
A
NP:
D
116
E
NP:
A
124
S
NP:
A
147
T
NP:
N
150
H
NP:
Q
179
L
NP:
D
199
E
NP:
T
241
A
NP:
R
270
K
NP:
A
271
S
NP:
Q
405
L
NP:
N
419
S
NP:
T
422
A
NP:
R
428
K
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RdRp
RdRp:
S
6
D
RdRp:
Y
60
N
RdRp:
S
67
L
RdRp:
I
131
M
RdRp:
I
176
M
RdRp:
N
206
H
RdRp:
V
214
I
RdRp:
V
259
I
RdRp:
R
302
K
RdRp:
T
406
I
RdRp:
S
409
G
RdRp:
I
451
V
RdRp:
I
505
T
RdRp:
V
713
M
RdRp:
G
763
E
RdRp:
R
764
K
RdRp:
T
767
A
RdRp:
R
770
K
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
M segment
S segment
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