This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S69R.1

France/LOC_000S69R.1/2016-09-26
M. Bisseux, A. Mirand, C. Henquell & J.-L. Bailly

Centre National de Reference Enterovirus et Parechovirus - Chu Clermont Ferrand, Virologie

Sample details

Collection date
2016-09-26
Earliest release date
2025-04-12
Sampling location
France
Isolate name
S1_3162860481_C2_COC_FRA_26_09_2016

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-04-12
NCBI update date
2025-04-12
INSDC accession

Host

Host

Submission details

Submission ID
PQ284386.1
Submitting group
Date submitted
2026-10-05 13:33:40 UTC
Date released
2026-10-05 13:45:18 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
55
Length
306 (4.13%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • C2594T
  • T2600G
  • G2603A
  • G2606A
  • T2609C
  • T2612C
  • T2624C
  • T2630C
  • T2636G
  • G2639A
  • T2645C
  • C2651T
  • A2669G
  • C2675G
  • T2684C
  • C2687T
  • C2702A
  • G2711A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
Deletions
N/A
Insertions
N/A

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