This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S641.1

Display Name: Egypt/LOC_000S641.1/2021
F. Rasslan, H. A. Bendary, A. M. Zaki & A. K. Abdulall

Sample details

Collection date
2021
Collection date (lower bound)
2021-01-01
Collection date (upper bound)
2021-08-01
Earliest release date
2021-08-01
Collection country
Egypt
Isolate name
20

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-04 16:38insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Faculty of Pharmacy (Girls), Al-Azhar University, Microbiology and Immunology

INSDC

NCBI release date
2021-08-01
INSDC accession S

Host

Host taxon id
Host name scientific
Camelus

Alignment and QC metrics S

Length S
248
Total SNPs S
45
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
13.73%
Total stop codons S
0

Submission details

Submission ID
MZ322095.1.S
Submitting group
Date submitted
2026-02-04 16:38:39 UTC
Date released
2026-02-04 16:45:35 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S

  • S:T297A
  • S:C300T
  • S:T303A
  • S:A311G
  • S:G312A
  • S:A315C
  • S:T318C
  • S:A321G
  • S:C327T
  • S:G330A
  • S:T336C
  • S:G337A
  • S:G339A
  • S:C342A
  • S:G351A
  • S:A363G
  • S:T366C
  • S:T369C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & OL774851.1 references

    Substitutions

    NP

  • NP:K91R
  • NP:A100T
  • NP:A154S
    • Deletions
    None
    Insertions
    None

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