This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S5WH.1

Display Name: Taiwan/LOC_000S5WH.1
C. H. Chen, M. T. Wan & J. W. Tsai

Sample details

Collection date (upper bound)
2005-10-30
Earliest release date
2005-10-30
Collection country
Taiwan
Isolate name
C45

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-15 08:09insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Tatung University, Bioengineening

INSDC

NCBI release date
2005-10-30
INSDC accession CV-A16

Alignment and QC metrics CV-A16

Length CV-A16
389
Total SNPs CV-A16
31
Total inserted nucs CV-A16
0
Total deleted nucs CV-A16
15
Total ambiguous nucs CV-A16
0
Total unknown nucs CV-A16
0
Total frame shifts CV-A16
0
Completeness CV-A16
5.45%

Submission details

Submission ID
DQ230083.1.CV-A16
Submitting group
Date submitted
2025-10-15 08:09:46 UTC
Date released
2025-10-15 08:15:02 UTC

Clade

Clade CV-A16
B1

Genotype

Genotype
CV-A16

Files

Annotations

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • C156A
  • T162C
  • C194T
  • G224A
  • C236T
  • C242T
  • G263A
  • A276G
  • A287G
  • C339T
  • T342A
  • G360A
  • T385C
  • G386A
  • C399T
  • A400G
  • T414C
  • G415A
    • Deletions
    163-176, 181
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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