This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000RKNM.1

Germany/LOC_000RKNM.1/2006
S. Diedrich, A. Weinbrecht & E. Schreier

Robert Koch-Institute, Molecular Epidemiology of Viral Pathogens

Sample details

Collection date
2006
Earliest release date
2008-12-22
Sampling location
Germany
Isolate name
06-180/Berlin/DEU

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2008-12-22
NCBI update date
2016-07-24
INSDC accession

Host

Host

Submission details

Submission ID
FJ472965.1
Submitting group
Date submitted
2026-10-23 14:52:55 UTC
Date released
2026-10-23 14:55:19 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
27
Length
209 (2.82%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • T2600A
  • G2603A
  • G2606A
  • T2636G
  • G2639A
  • C2651T
  • C2653T
  • A2669G
  • C2675T
  • T2684C
  • C2687T
  • C2702A
  • G2711A
  • T2720C
  • T2723C
  • A2729T
  • A2730G
  • G2732A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:S72L
  • VP1:K98E
Deletions
N/A
Insertions
N/A

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