This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QB24.1

Malaysia/LOC_000QB24.1
M. J. Cardosa & D. Perera

Institute of Health and Community Medicine, Universiti Malaysia Sarawak

Sample details

Earliest release date
2006-01-31
Sampling location
Malaysia (Sarawak)
Isolate name
SB12869-SAR-03

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-16 08:46insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2006-01-31
NCBI update date
2016-07-26
INSDC accession

Host

Host

Submission details

Submission ID
AY905545.1
Submitting group
Date submitted
2026-04-16 08:46:33 UTC
Date released
2026-04-16 08:49:01 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
166
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2441A
  • C2444T
  • T2462C
  • T2480C
  • A2491G
  • C2495A
  • C2503A
  • A2504G
  • T2507C
  • T2508C
  • A2510G
  • T2513A
  • C2519T
  • C2525T
  • C2527A
  • G2529A
  • C2534A
  • A2537G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K43E
  • VP1:A58T
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S184T
  • VP1:E244K
  • VP1:S246P
  • VP1:I249V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

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