This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q98U.1

Nigeria/WNV#119/2018-01-01
B. S. Oderinde, E. Mora-Cardenas, T. Carletti, M. M. Baba, A. Marcello, O. S. Bamidele, M.-C. Erick, C. Tea & B. M. Marycelin

ICGEB, Molecular Virology

Sample details

Collection date
2018
Earliest release date
2020-07-06
Sampling location
Nigeria (Borno State)
Isolate name
WNV#119

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 14:38insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2020-07-06
NCBI update date
2020-07-06
INSDC accession

Host

Host

Submission details

Submission ID
MT132386.1
Submitting group
Date submitted
2026-05-22 14:37:53 UTC
Date released
2026-05-22 14:55:08 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
4
Total deleted nucs
24
Length
110 (1.21%)
Amino Acid Mutations from founder clade
  • NS5:R543T
  • NS5:I544E
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A9291C
  • T9294C
  • A9332C
  • G9337A
Deletions

9306-9329
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R543T
  • NS5:I544E
Deletions
N/A
Insertions
N/A

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