This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q8WJ.1

India/PREDICT_INAH0038/2017-10-12

Sample details

Collection date
2017-10-12
Earliest release date
2022-05-29
Sampling location
India
Isolate name
PREDICT_INAH0038

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-22 14:38insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-05-29
NCBI update date
2022-05-29
INSDC accession

Host

Host

Submission details

Submission ID
MT125055.1
Submitting group
Date submitted
2026-05-22 14:37:53 UTC
Date released
2026-05-22 14:55:08 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
57
Length
231 (2.09%)
Amino Acid Mutations from founder clade
  • NS5:P464S
  • NS5:G468K
  • NS5:S473R
  • NS5:G492V
  • NS5:E496A
  • NS5:D497H
  • NS5:H498P
  • NS5:G501R
  • NS5:V509P
  • NS5:G511W
  • NS5:G518E
  • NS5:T526K
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • A9066G
  • A9069G
  • C9070T
  • C9072T
  • A9075C
  • G9082A
  • G9083A
  • C9090T
  • A9096G
  • C9099G
  • T9108C
  • C9123G
  • A9126G
  • T9135C
  • C9144T
  • G9147A
  • T9150C
  • G9153C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:P464S
  • NS5:G468K
  • NS5:S473R
  • NS5:G492V
  • NS5:E496A
  • NS5:D497H
  • NS5:H498P
  • NS5:G501R
  • NS5:V509P
  • NS5:G511W
  • NS5:G518E
  • NS5:R522K
  • NS5:T526K
  • NS5:R527K
Deletions
N/A
Insertions
N/A

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