This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3UT.1

Egypt/LOC_000Q3UT.1/2021-01-01_TO_2021-08-30
H. A. Bendary, F. Rasslan, A. M. Zaki & A. K. Abdulall

Faculty of Pharmacy (Girls), Al-Azhar University, Microbiology and Immunology

Sample details

Collection date
2021-01-01/2021-08-30
Earliest release date
2021-08-30
Sampling location
Egypt
Isolate name
21

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2021-08-30
INSDC accession S segment

Host

Host

Submission details

Submission ID
MZ361738.1.S
Submitting group
Date submitted
2026-09-10 12:22:01 UTC
Date released
2026-09-10 12:24:54 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
45
Length S segment
251 (13.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T297A
  • C300T
  • T303A
  • A311G
  • G312A
  • A315C
  • T318C
  • A321G
  • C327T
  • G330A
  • T336C
  • G337A
  • G339A
  • C342A
  • G351A
  • A363G
  • T366C
  • T369C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K91R
  • NP:A100T
  • NP:A154S
Deletions
N/A
Insertions
N/A

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