This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3EN.1

USA/LOC_000Q3EN.1
L. Tallon, L. Sadzewicz, K. Vavikolanu, A. Mehta, J. Aluvathingal, S. Nadendla, T. Myers, Y. Yan & H. Sichtig

US Food and Drug Administration, Center for Devices and Radiological Health

Sample details

Earliest release date
2022-07-30
Sampling location
USA (MD)
Isolate name
IbAr10200

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-06 10:59insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2022-07-30
INSDC accession M segment
BioProject accession
BioSample accession
Raw reads accession

Submission details

Submission ID
OK573222.1.M
Submitting group
Date submitted
2026-06-06 10:59:22 UTC
Date released
2026-06-06 11:04:34 UTC

Clade & Lineage

Closest reference M segment
M (MH396653.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs M segment
62
Length M segment
346 (6.34%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • C5026T
  • A5031G
  • C5035T
  • G5043A
  • G5047A
  • C5053T
  • G5070A
  • G5071A
  • C5098T
  • A5103G
  • G5104A
  • T5110C
  • C5122T
  • T5145C
  • C5150T
  • G5152A
  • G5154T
  • G5161T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:K1648R
  • GPC:R1652K
  • GPC:R1661K
  • GPC:K1672R
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue