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LOC_000Q3EN.1
Download
Download FASTA
Download metadata TSV
China/LOC_000Q3EN.1/1975
A. Moming,
Q. Zhu,
Y. Bai,
J. Jin,
Q. Wu,
Z. Su,
S. Tang,
Y. Zhang,
S. Shen &
F. Deng
Wuhan Institute of Virology, Chinese Academy of Sciences
Sample details
Collection date
1975
Earliest release date
2023-08-21
Sampling location
China
Isolate name
75024
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-02-27 15:36
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2023-08-21
INSDC accession L
OR047184.1
INSDC accession M
OR047164.1
INSDC accession S
OR047144.1
Submission details
Submission ID
OR047184.1.L/OR047164.1.M/OR047144.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-02-27 15:36:26 UTC
Date released
2026-02-27 15:40:27 UTC
Host
Host
Homo sapiens
Files
Annotations
LOC_000Q3EN.1.embl
Alignment and QC
Total SNPs M
615
Total inserted nucs M
5
Total deleted nucs M
11
Length M
5356 (98.3%)
Variant M
False
Total SNPs S
220
Total inserted nucs S
18
Total deleted nucs S
2
Length S
1673 (91.7%)
Variant S
False
Total SNPs L
1646
Total inserted nucs L
72
Length L
12180 (100%)
Variant L
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
L segment
T
1
A
C
2
T
T
3
G
C
4
G
A
5
G
G
8
T
T
10
C
A
11
T
C
13
G
A
14
C
T
16
A
C
18
A
C
20
A
C
22
T
G
23
C
A
26
T
C
27
T
C
28
A
Show more
M segment
T
64
C
G
65
A
G
72
A
A
76
G
T
78
C
C
82
T
A
84
G
C
88
T
A
108
G
T
116
C
C
118
T
A
127
G
G
132
A
C
133
T
A
139
G
A
143
G
G
145
A
A
149
C
Show more
S segment
T
16
A
C
31
G
T
32
C
G
34
A
A
45
G
C
48
T
G
75
A
A
84
G
A
98
T
A
102
G
C
123
T
C
126
T
T
141
C
C
150
T
T
166
C
C
171
A
A
173
G
C
183
T
Show more
Deletions
M segment
5285-5295
S segment
1596, 1597
Insertions
L segment
ins_0:TCTG, ins_71:GGCAGGACTCTCACTACCACACT, ins_11925:GT, ins_12054:TACAGTTCT, ins_12083:GCTATTT, ins_12108:TTCATTATTTCCAGGGTGTGGGGGGAA
M segment
ins_0:TCTT, ins_5166:A
S segment
ins_0:CGGACAAAGAAACACGT, ins_1514:T
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
Y
7
C
GPC:
F
10
L
GPC:
C
15
Y
GPC:
K
19
E
GPC:
N
21
H
GPC:
P
23
S
GPC:
H
24
S
GPC:
G
26
E
GPC:
N
31
K
GPC:
H
33
N
GPC:
M
35
V
GPC:
D
39
G
GPC:
P
47
L
GPC:
A
51
T
GPC:
P
56
L
GPC:
P
58
S
GPC:
S
64
T
GPC:
L
70
P
Show more
NP
NP:
Y
20
F
NP:
D
44
E
NP:
K
45
R
NP:
D
116
E
NP:
N
150
H
NP:
Q
179
L
NP:
D
199
E
NP:
K
208
T
NP:
R
270
K
NP:
S
275
N
NP:
R
428
K
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
I
45
M
RdRp:
H
59
Y
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
V
RdRp:
R
80
K
RdRp:
V
82
I
RdRp:
I
114
V
RdRp:
T
163
A
RdRp:
E
167
G
RdRp:
A
168
T
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
K
275
R
Show more
Deletions
N/A
Insertions
N/A
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
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