This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3DQ.1

Display Name: LOC_000Q3DQ.1
R. Lofts, L. Hodgson & J. F. Smith

Sample details

Collection date (upper bound)
1997-03-04
Earliest release date
1997-03-04

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-04 14:36insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Virology Division, USAMRIID, Bldg. 1425, Fort Detrick, Frederick, MD 21701

INSDC

NCBI release date
1997-03-04
INSDC accession S

Alignment and QC metrics S

Length S
1673
Total SNPs S
114
Total inserted nucs S
1
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
100.00%

Submission details

Submission ID
U88415.1.S
Submitting group
Date submitted
2025-11-04 14:36:22 UTC
Date released
2025-11-04 14:46:06 UTC

Lineage

Segment S Lineage
III

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:G54A
  • S:G67A
  • S:C70T
  • S:G99A
  • S:C166T
  • S:C178A
  • S:G189A
  • S:T199C
  • S:G202A
  • S:G229A
  • S:C235T
  • S:A247G
  • S:G271A
  • S:A284G
  • S:C295T
  • S:A322G
  • S:A327G
  • S:G346A
    • Deletions
    None
    Insertions
    ins_S:1577:A

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:R15K
  • NP:R45K
  • NP:I77V
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
  • NP:I246V
  • NP:S301G
  • NP:S367T
  • NP:K428R
  • NP:V436I
  • NP:A479V
    • Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue