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LOC_000Q2ZJ.1
Download
Download FASTA
Download metadata TSV
Turkey/LOC_000Q2ZJ.1/2016
A. T. Kalaycioglu,
R. Durmaz,
O. Ari,
M. Bakir,
A. Engin &
T. Dal
Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology
Sample details
Collection date
2016
Earliest release date
2023-08-15
Sampling location
Turkey
Isolate name
TR-YOZGAT-C50M-2016
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-04-09 14:51
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2023-08-15
INSDC accession M
OQ935550.1
INSDC accession S
OQ954467.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OQ935550.1.M/OQ954467.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-09 14:51:52 UTC
Date released
2026-04-09 15:02:52 UTC
Lineage
Segment S Lineage
V
Files
Annotations
LOC_000Q2ZJ.1.embl
Alignment and QC
Total SNPs M
126
Length M
783 (14.6%)
Variant M
False
Total SNPs S
78
Length S
527 (31.5%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
M
C
1678
T
A
1679
C
A
1688
G
A
1694
G
G
1703
A
T
1706
A
C
1715
T
C
1718
T
G
1720
A
C
1721
T
C
1724
T
G
1739
A
C
1745
T
C
1754
T
T
1763
C
C
1766
T
C
1781
T
A
1784
G
Show more
S
T
157
C
C
166
T
G
171
A
T
175
A
C
178
A
T
182
C
C
187
T
G
189
A
T
199
C
T
211
C
C
217
T
C
235
T
C
244
T
T
250
G
G
262
A
A
268
C
T
274
C
T
283
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
G
543
D
GPC:
R
579
K
GPC:
N
592
T
GPC:
V
598
T
GPC:
Y
606
F
GPC:
R
609
K
GPC:
A
630
V
GPC:
T
633
S
GPC:
I
637
V
GPC:
K
669
H
GPC:
I
670
V
GPC:
K
675
R
GPC:
K
688
R
GPC:
L
707
F
GPC:
I
711
L
GPC:
L
714
S
GPC:
V
718
I
GPC:
R
724
K
Show more
NP
NP:
S
39
N
NP:
R
45
K
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
T
124
A
NP:
G
125
N
NP:
H
195
R
NP:
D
199
E
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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