This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q2WQ.1

Turkey/LOC_000Q2WQ.1/2021
A. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin, M. Bakir, T. Dal & A. T. Kalaycioglu

Karadeniz Technical University, Faculty of Pharmacy

Sample details

Collection date
2021
Earliest release date
2023-08-15
Sampling location
Turkey
Isolate name
TR-SIVAS-C15M-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-23 16:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-08-15
INSDC accession M segment

Submission details

Submission ID
OQ935539.1.M
Submitting group
Date submitted
2026-03-23 16:00:01 UTC
Date released
2026-03-23 16:03:50 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M segment
149
Length M segment
884 (16.2%)
Variant M segment
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • T1627A
  • T1630C
  • G1638A
  • T1640C
  • G1642A
  • T1645G
  • A1654G
  • T1655C
  • T1657A
  • C1688T
  • G1699A
  • T1702A
  • G1709A
  • C1711T
  • G1716A
  • C1717T
  • T1729C
  • T1732C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:R517K
  • GPC:S523P
  • GPC:V541I
  • GPC:G543D
  • GPC:V561I
  • GPC:R579K
  • GPC:S592T
  • GPC:I598T
  • GPC:K603R
  • GPC:Y606F
  • GPC:V663I
  • GPC:K669H
  • GPC:I670V
  • GPC:K675R
  • GPC:L707F
  • GPC:I711L
  • GPC:F713Y
  • GPC:F718I
Deletions
N/A
Insertions
N/A

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