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LOC_000Q2UU.1
Download
Download FASTA
Download metadata TSV
China/LOC_000Q2UU.1/2021-04-15
J. Wang,
B. Wang,
X. Xia,
J. Zhou &
Y. Wang
Kunming University of Science and Technology, Faculty of Life Science and Technology
Sample details
Collection date
2021-04-15
Earliest release date
2023-05-30
Sampling location
China
Isolate name
YNDQ-L415G
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-30 18:12
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2023-05-30
INSDC accession L segment
OQ633002.1
INSDC accession M segment
OQ633003.1
INSDC accession S segment
OQ633004.1
Submission details
Submission ID
OQ633002.1.L/OQ633003.1.M/OQ633004.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-30 18:11:55 UTC
Date released
2026-03-30 18:17:58 UTC
Host
Host
Capricornis milneedwardsii
Clade & Lineage
Closest reference L segment
singleReference (variant)
Closest reference M segment
M (OR047158.1) (variant)
Closest reference S segment
S1 (OL774851.1)
Files
Annotations
LOC_000Q2UU.1.embl
Alignment and QC
Total SNPs L segment
2406
Length L segment
11838 (97.8%)
Total SNPs M segment
1077
Length M segment
5103 (94.5%)
Total SNPs S segment
252
Length S segment
1449 (80.2%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
OR047158.1
&
OL774851.1
references
Substitutions
L segment
C
82
G
T
86
C
G
88
A
G
93
A
C
95
A
A
109
G
C
117
A
T
121
C
A
124
G
G
130
A
T
131
A
T
139
C
T
151
C
T
154
A
T
157
C
G
172
C
G
175
A
C
199
T
Show more
M segment
T
81
C
G
82
T
T
84
G
T
89
A
G
92
A
A
93
T
T
97
C
T
104
C
A
107
T
C
112
T
C
115
A
T
117
C
T
119
C
C
121
T
T
122
C
G
123
A
C
124
T
A
128
C
Show more
S segment
A
45
G
C
48
T
C
54
T
G
57
A
T
63
C
A
69
G
A
76
C
C
81
T
A
83
G
A
84
G
T
90
C
A
93
G
A
98
T
A
102
G
A
105
G
T
111
C
A
114
G
C
138
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
OR047158.1
&
OL774851.1
references
Substitutions
GPC
GPC:
L
2
S
GPC:
F
3
C
GPC:
F
5
I
GPC:
E
6
I
GPC:
I
11
F
GPC:
F
13
L
GPC:
V
14
A
GPC:
F
15
L
GPC:
C
16
H
GPC:
I
18
L
GPC:
S
21
G
GPC:
L
25
S
GPC:
A
26
V
GPC:
D
27
S
GPC:
A
29
T
GPC:
R
30
S
GPC:
S
34
N
GPC:
M
35
A
Show more
NP
NP:
M
13
L
NP:
K
15
R
NP:
Y
20
F
NP:
Y
34
H
NP:
S
39
N
NP:
K
45
R
NP:
S
52
G
NP:
A
100
T
NP:
V
141
I
NP:
N
144
S
NP:
A
154
S
NP:
Q
179
L
NP:
G
185
S
NP:
N
188
S
NP:
V
198
I
NP:
D
199
E
NP:
V
205
I
NP:
I
220
V
Show more
RdRp
RdRp:
D
2
E
RdRp:
S
6
N
RdRp:
L
7
I
RdRp:
A
14
D
RdRp:
S
19
T
RdRp:
H
56
Y
RdRp:
Y
60
N
RdRp:
I
61
V
RdRp:
S
67
V
RdRp:
Y
72
F
RdRp:
E
75
D
RdRp:
R
80
K
RdRp:
K
91
Q
RdRp:
L
94
T
RdRp:
A
122
T
RdRp:
D
135
E
RdRp:
I
157
M
RdRp:
T
163
V
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
M segment
S segment
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