This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
Display Name: China/LOC_000Q2SY.1/2008-05-07
Y. Zhang, D. Wang, D. Yan, S. Zhu, J. Liu, H. Wang, S. Zhao, D. Yu, L. Nan, J. An, L. Chen, H. An, A. Xu, W. Xu, D.-Y. Wang, S.-L. Zhu, J.-F. Liu, H.-Y. Wang, L.-J. Nan, D.-S. Yu, S.-C. Zhao, D.-M. Yan, X.-J. Tan, H.-Q. An, A.-Q. Xu & W.-B. Xu

Sample details

Collection date
2008-05-07
Collection date (lower bound)
2008-05-07
Collection date (upper bound)
2008-05-07
Earliest release date
2010-02-17
Collection country
China
Isolate name
GS0019T/GS/CHN/2008

Data use terms

Data use terms
OPEN
Data use terms URL

Authors

Author affiliations
Institute for Viral Disease Control and Prevention, Chinese Center for Disease Control and Prevention, WHO WPRO Regional Polio Reference Laboratory, State Key Laboratory for Molecular Virology & Genetic Engineering

INSDC

NCBI release date
2010-02-17
NCBI update date
2016-07-25
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens
Is lab host
True

Alignment and QC metrics

Length
891
Total SNPs
216
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
12.02%
Total stop codons
0

Submission details

Submission ID
GQ429241.1
Date submitted
2026-01-07 17:00:16 UTC
Date released
2026-01-07 17:03:17 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • T2448G
  • G2452C
  • G2453C
  • A2454C
  • T2469C
  • G2475A
  • G2476A
  • T2478C
  • C2481G
  • C2483A
  • T2485A
  • C2486A
  • G2489A
  • T2493G
  • G2494A
  • G2495A
  • T2496C
  • T2499C
  • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions

    VP1

  • VP1:G3P
  • VP1:A11T
  • VP1:T13N
  • VP1:S14N
  • VP1:R15Q
  • VP1:G17N
  • VP1:A19S
  • VP1:S22A
  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:I179V
  • Deletions
    None
    Insertions
    None

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