This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q2AX.1

Display Name: Japan/LOC_000Q2AX.1
H. Shimizu

Sample details

Collection date (upper bound)
2001-10-13
Earliest release date
2001-10-13
Collection country
Japan

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-13 08:44insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Hiroyuki Shimizu, National Institute of Infectious Diseases, Department of Virology II; Gakuen 4-7-1, Musashimurayama, Tokyo 208-0011

INSDC

NCBI release date
2001-10-13
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
617
Total SNPs EV-A71
77
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
140
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
10.22%

Submission details

Submission ID
AB059825.1.EV-A71
Submitting group
Date submitted
2025-10-13 08:43:45 UTC
Date released
2025-10-13 08:44:58 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T135C
  • T138C
  • T142C
  • G143A
  • A146G
  • T149C
  • T155C
  • C156T
  • G157A
  • C158T
  • A159G
  • A180T
  • G208T
  • A212G
  • A228G
  • C238T
  • G259A
  • A267G
    • Deletions
    740-879
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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