This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1M9.1

India/LOC_000Q1M9.1/2019
P. Yadav, A. Shete-Aich, D. Nyayanit & R. Sahay

National Institute of Virology, Maximum Containment Laboratory

Sample details

Collection date
2019
Earliest release date
2021-08-07
Sampling location
India (Rajasthan State, Sirohi)
Isolate name
MCL-19-H-3154

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2021-08-07
INSDC accession M

Host

Host

Submission details

Submission ID
MW298542.1.M
Submitting group
Date submitted
2026-08-07 11:59:41 UTC
Date released
2026-08-07 12:04:42 UTC

Files

Annotations

Alignment and QC

Total SNPs M
676
Total inserted nucs M
1
Length M
5337 (99.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • G55A
  • A57G
  • G76A
  • C85T
  • T86C
  • A101G
  • A107G
  • A117G
  • C119T
  • C120T
  • T122C
  • C126T
  • A128G
  • G143A
  • A146G
  • G147A
  • G149A
  • T152C
Deletions
N/A
Insertions

M

ins_5169:G

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:I3M
  • GPC:I9V
  • GPC:L10F
  • GPC:E19K
  • GPC:E26G
  • GPC:R28G
  • GPC:T34V
  • GPC:N41S
  • GPC:P42Q
  • GPC:S44P
  • GPC:P47L
  • GPC:S53P
  • GPC:I54F
  • GPC:L56P
  • GPC:P66L
  • GPC:G69R
  • GPC:V76P
  • GPC:I82A
Deletions
N/A
Insertions
N/A

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