This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1M9.1

Display Name: Viet_Nam/LOC_000Q1M9.1/2018-10-05
L. N. Golitsyna, T. T. T. Nguyen, N. I. Romanenkova, A. V. Leonov, N. V. Ponomareva, V. V. Zverev, O. I. Kanaeva, N. R. Rozaeva, M. A. Bichurina & N. A. Novikova

Sample details

Collection date
2018-10-05
Collection date (lower bound)
2018-10-05
Collection date (upper bound)
2018-10-05
Earliest release date
2024-12-01
Collection country
Viet Nam
Isolate name
18/114_VNM_2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-27 07:37insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
I.N. Blokhina Nizhny Novgorod Research Institute of Epidemiology and Microbiology, Laboratory of Molecular Epidemiology of Viral Infections

INSDC

NCBI release date
2024-12-01

Alignment and QC metrics

Length
891
Total SNPs
156
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
12.03%
Total stop codons
0

Submission details

Submission ID
OP947996.1.EV-A71
Submitting group
Date submitted
2025-11-27 07:37:01 UTC
Date released
2025-11-27 08:26:24 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2444T
  • A2447G
  • T2462C
  • A2477G
  • A2491G
  • C2495A
  • C2503G
  • A2504G
  • T2507C
  • T2508C
  • A2510G
  • T2513G
  • C2525A
  • C2527A
  • G2529A
  • C2534A
  • A2537G
  • C2552A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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