This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1M9.1

Turkey/LOC_000Q1M9.1
K. Midilli, A. Gargili, G. Yilmaz, G. Sengoz, R. Ozturk & K. Altas

Cerrahpasa Medical Faculty of Istanbul University, Microbiology and Clinical Microbiology

Sample details

Earliest release date
2006-09-17
Sampling location
Turkey
Isolate name
CTF-Hu30/06

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2006-09-17
INSDC accession S segment

Host

Host

Submission details

Submission ID
DQ983745.1.S
Submitting group
Date submitted
2026-09-04 15:29:37 UTC
Date released
2026-09-04 15:31:04 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
79
Length S segment
599 (33.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T141C
  • C150T
  • G155A
  • T159A
  • T166C
  • C171T
  • A186G
  • T195C
  • C201T
  • A213G
  • T219C
  • C228T
  • G231A
  • T234A
  • G240A
  • G246A
  • A252C
  • A255G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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