This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1KD.1

Turkey/LOC_000Q1KD.1/2021
S. Zarrabi Ahrabi, G. Akyildiz & A. Gargili Keles

Marmara University, Faculty of Health Sciences/Basic Health Sciences Department

Sample details

Collection date
2021
Earliest release date
2023-06-27
Sampling location
Turkey (Istanbul)
Isolate name
SZAMU-75

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-30 18:12insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-06-27
INSDC accession S segment

Submission details

Submission ID
OQ377564.1.S
Submitting group
Date submitted
2026-03-30 18:11:55 UTC
Date released
2026-03-30 18:17:58 UTC

Host

Host

Clade & Lineage

Closest reference S segment
S11 (MK299338.1)

Files

Annotations

Alignment and QC

Total SNPs S segment
33
Length S segment
213 (12.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MK299338.1 references

Substitutions

S segment

  • G264A
  • A270G
  • A282C
  • G291A
  • T303C
  • A312C
  • A315C
  • A321G
  • T330A
  • A348G
  • C351T
  • A352T
  • A355G
  • C357A
  • G366A
  • G380A
  • C384T
  • A385G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MK299338.1 references

Substitutions

NP

  • NP:T100S
  • NP:S101G
  • NP:S109N
  • NP:T111A
  • NP:I117V
  • NP:S124A
  • NP:S125N
Deletions
N/A
Insertions
N/A

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