This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q1KD.1

Display Name: LOC_000Q1KD.1
A. C. Marriott, F. Berthet, P. A. Nuttall & H. G. Zeller

Sample details

Collection date (upper bound)
1995-03-31
Earliest release date
1995-03-31
Isolate name
ArD 8194

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-24 15:13insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Marriott A.C., NERC Institute of Virology & Environmental Microbiology, Mansfield Road, Oxford, OX1 3SR

INSDC

NCBI release date
1995-03-31
INSDC accession S

Alignment and QC metrics S

Length S
499
Total SNPs S
92
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
29.84%

Submission details

Submission ID
U15021.1.S
Submitting group
Date submitted
2025-10-24 15:13:55 UTC
Date released
2025-10-24 15:20:07 UTC

Lineage

Segment S Lineage
I

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:C160T
  • S:T163C
  • S:C166T
  • S:G171A
  • S:T172C
  • S:G173A
  • S:T175G
  • S:C178G
  • S:T181C
  • S:T182C
  • S:G184T
  • S:G196A
  • S:T199C
  • S:C208T
  • S:A209G
  • S:C214A
  • S:G232A
  • S:C235T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:S39N
  • NP:V40M
  • NP:S52G
  • NP:F73Y
  • NP:K91R
  • NP:A100T
  • NP:T124A
  • NP:G125N
  • NP:A154S
  • NP:H195K
  • NP:V198I
  • NP:D199E
    • Deletions
    None
    Insertions
    None

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