This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q0LC.1

Display Name: Turkey/LOC_000Q0LC.1
E. Dincer, M. O. Timurkan, B. Oguz, E. Ozan, N. Coskun, S. Kiziltepe, P. F. P. Dincer, A. Sahan, D. Yalcinkaya, O. F. Gokcecik, M. B. Nayir, S. H. Bayendur, B. P. Bourke, Y. M. Linton & K. Ergunay

Sample details

Collection date (upper bound)
2025-10-24
Earliest release date
2025-10-24
Collection country
Turkey
Isolate name
Kars115

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-27 14:18insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Smithsonian Institution, Department of Entomology

INSDC

NCBI release date
2025-10-24
INSDC accession L

Host

Host taxon id
Host name scientific
Haemaphysalis parva

Alignment and QC metrics L

Length L
435
Total SNPs L
88
Total inserted nucs L
0
Total deleted nucs L
0
Total ambiguous nucs L
0
Total unknown nucs L
0
Total frame shifts L
0
Completeness L
3.59%

Submission details

Submission ID
PV536534.1.L
Submitting group
Date submitted
2025-10-27 14:18:35 UTC
Date released
2025-10-27 14:25:03 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • L:G6739A
  • L:T6742C
  • L:T6745C
  • L:G6748A
  • L:G6754A
  • L:T6760A
  • L:C6766T
  • L:A6772G
  • L:G6778A
  • L:A6784T
  • L:T6787C
  • L:G6790A
  • L:A6799G
  • L:A6802G
  • L:G6805A
  • L:A6808T
  • L:A6814G
  • L:A6823C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    RdRp

  • RdRp:A2330T
    • Deletions
    None
    Insertions
    None

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