This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZNB.1

Turkey/LOC_000PZNB.1/2021
A. T. Kalaycioglu, T. C. Oguzoglu, O. Ari, R. Durmaz, A. Engin & M. Bakir

Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology

Sample details

Collection date
2021
Earliest release date
2023-02-01
Sampling location
Turkey
Isolate name
TR-SIVAS-C6M-2021

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-23 16:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-02-01
INSDC accession S segment

Submission details

Submission ID
ON254098.1.S
Submitting group
Date submitted
2026-03-23 16:00:01 UTC
Date released
2026-03-23 16:03:50 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S segment
259
Total inserted nucs S segment
16
Length S segment
1673 (91.7%)
Variant S segment
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T16A
  • C31G
  • T33C
  • G34T
  • A51G
  • T63C
  • A65G
  • A69G
  • A93G
  • A98T
  • C99T
  • A105G
  • G118A
  • C126T
  • T141C
  • C150T
  • G155A
  • T159A
Deletions
N/A
Insertions

S segment

ins_0:TCTCAAAGAAACACGT

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:N9S
  • NP:Y20F
  • NP:V27M
  • NP:S39N
  • NP:A100S
  • NP:S105T
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
  • NP:Y260H
  • NP:K265R
  • NP:R270K
  • NP:A307P
  • NP:Y311F
  • NP:V327I
  • NP:N419S
  • NP:R428K
Deletions
N/A
Insertions
N/A

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