This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PXR7.1

Display Name: Kazakhstan/LOC_000PXR7.1/2024
B. M. A. Maxat, M. G. K. Gulzhan, M. K. T. Kydyrbay, S. S. K. Serik, K. B. A. Balzhan & N. B. R. Botagoz

Sample details

Collection date
2024
Collection date (lower bound)
2024-01-01
Collection date (upper bound)
2024-12-31
Earliest release date
2025-05-21
Collection country
Kazakhstan
Collection subdivision level 1
Turkestan, Maktaral
Isolate name
KAZ/75/2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-14 07:07insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Kazakh Scientific Research Veterinary Institute

INSDC

NCBI release date
2025-05-21
INSDC accession S

Host

Host taxon id
Host name scientific
Ixodoidea

Alignment and QC metrics S

Length S
484
Total SNPs S
68
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
28.95%

Submission details

Submission ID
PV646616.1.S
Submitting group
Date submitted
2025-10-14 07:07:07 UTC
Date released
2025-10-14 07:14:59 UTC

Lineage

Segment S Lineage
IV.2

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:T157C
  • S:C166T
  • S:C178A
  • S:T182C
  • S:G190A
  • S:G196A
  • S:T199C
  • S:C217T
  • S:G229A
  • S:C235T
  • S:T250A
  • S:G256A
  • S:G262A
  • S:A268C
  • S:G271A
  • S:T274C
  • S:T277C
  • S:T289C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:D116E
  • NP:T124A
  • NP:G125N
  • NP:N150H
    • Deletions
    None
    Insertions
    None

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