This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PDEE.1

Display Name: LOC_000PDEE.1
H. Norder, L. Bjerregaard, L. Magnius, B. Lina, M. Aymard, J. J. Chomel, L. O. Magnius & J.-J. Chomel

Sample details

Collection date (upper bound)
2003-03-05
Earliest release date
2003-03-05

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-15 15:26insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Swedish Institute for Infectious Disease Control, Virological Department

INSDC

NCBI release date
2003-03-05
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
588
Total SNPs EV-A71
92
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
7.94%

Submission details

Submission ID
AY208095.1.EV-A71
Submitting group
Date submitted
2025-10-15 15:26:18 UTC
Date released
2025-10-15 15:30:28 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2468T
  • A2477G
  • T2480C
  • T2489C
  • A2491G
  • G2492A
  • C2503G
  • T2508C
  • T2513G
  • C2519T
  • C2527A
  • G2529A
  • C2531T
  • C2534G
  • A2537G
  • G2540A
  • T2546C
  • C2552A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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