This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PD32.1

Display Name: LOC_000PD32.1
J. R. Wang, Y. C. Tuan, H. P. Tsai, J. J. Yan, C. C. Liu & I. J. Su

Sample details

Collection date (upper bound)
2002-01-16
Earliest release date
2002-01-16
Isolate name
M0177-TW-00

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-09 19:27insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
National Cheng Kung University, Medical Technology

INSDC

NCBI release date
2002-01-16
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
653
Total SNPs EV-A71
95
Total inserted nucs EV-A71
7
Total deleted nucs EV-A71
81
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
9.81%

Submission details

Submission ID
AY055148.1.EV-A71
Submitting group
Date submitted
2025-11-09 19:26:45 UTC
Date released
2025-11-09 19:30:36 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T99C
  • G100A
  • A101C
  • C120T
  • G121A
  • A124C
  • C126A
  • A128C
  • T135C
  • T138C
  • T142C
  • G143A
  • A146G
  • A148G
  • T149C
  • T155C
  • C156T
  • G157A
    • Deletions
    738-818
    Insertions
    ins_128:ACT, ins_163:T, ins_215:G, ins_237:AT

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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