This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PD08.1

Iran/LOC_000PD08.1/2015
S. Chinikar & N. Shahhosseini

Pasteur Institute of Iran

Sample details

Collection date
2015
Earliest release date
2016-12-31
Sampling location
Iran
Isolate name
IR-T3-RSP-Chabahar

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-10 12:20insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-12-31
INSDC accession S segment

Host

Host

Submission details

Submission ID
KU242341.1.S
Submitting group
Date submitted
2026-06-10 12:20:23 UTC
Date released
2026-06-10 12:22:42 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
70
Length S segment
530 (29.3%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G118T
  • T141C
  • C150T
  • T166C
  • C171T
  • A173G
  • G174A
  • G180A
  • C183T
  • A186G
  • A193G
  • C198T
  • C201T
  • G231A
  • T234A
  • G240A
  • A252T
  • T261C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:V27L
  • NP:K45R
  • NP:S52G
  • NP:D116E
  • NP:N150H
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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