This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PCXE.1

Iran/LOC_000PCXE.1/2009
M. Mahzounieh, E. Dincer, A. Faraji, H. Akin, A. Z. Akkutay & A. Ozkul

Ankara University, Faculty of Veterinary Medicine, Virology Department

Sample details

Collection date
2009
Earliest release date
2010-12-19
Sampling location
Iran
Isolate name
IR31/Sh/09

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2010-12-19
INSDC accession S

Host

Host

Submission details

Submission ID
HM853680.1.S
Submitting group
Date submitted
2026-09-11 12:57:02 UTC
Date released
2026-09-11 12:58:59 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
25
Length S
190 (11.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T481C
  • C484A
  • A490G
  • T496C
  • C497T
  • G499A
  • C514T
  • G538A
  • T550A
  • C553T
  • G559A
  • G580A
  • A583G
  • C589T
  • G592A
  • A598C
  • T607C
  • G616A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:H195R
  • NP:D199E
Deletions
N/A
Insertions
N/A

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