This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBWH.1

South_Africa/LOC_000PBWH.1/1984
M. Zivcec, L. Guerrero, C. Albarino, C. Spiropoulou, P. E. Rollin, T. G. Ksiazek, R. Swanepoel & S. T. Nichol

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
1984
Earliest release date
2017-09-06
Sampling location
South Africa
Isolate name
SPU41_84_813060_S

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-04 18:29insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-06
INSDC accession S

Submission details

Submission ID
MF511223.1.S
Submitting group
Date submitted
2026-03-04 18:29:04 UTC
Date released
2026-03-04 18:31:29 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
69
Total inserted nucs S
2
Total ambiguous nucs S
84
Length S
1575 (82.4%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T16A
  • C31G
  • A84G
  • A98T
  • C150T
  • T159C
  • A173G
  • G174A
  • C201T
  • A213G
  • G231A
  • G240A
  • T273C
  • A309G
  • A321G
  • G330A
  • G339A
  • T369C
Deletions
N/A
Insertions

S segment

ins_0:GW

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:Y20F
  • NP:K45R
  • NP:R428K
Deletions
N/A
Insertions
N/A

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