This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PBUM.1

Turkey/LOC_000PBUM.1/2004
M. Zivcec, L. Guerrero, C. Albarino, C. Spiropoulou, P. E. Rollin, T. G. Ksiazek & S. T. Nichol

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
2004
Earliest release date
2017-09-06
Sampling location
Turkey
Isolate name
Tur_2004_813145_S

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-09-06
INSDC accession S

Submission details

Submission ID
MF511213.1.S
Submitting group
Date submitted
2026-03-13 15:41:04 UTC
Date released
2026-03-13 15:47:29 UTC

Host

Host

Lineage

Segment S Lineage
V

Files

annotations

Alignment and QC

Total SNPs S
254
Total inserted nucs S
1
Length S
1661 (99.3%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • T49C
  • A50T
  • G54A
  • T79C
  • A81G
  • G99A
  • G100A
  • A109G
  • C115T
  • G134A
  • C142T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
Deletions
N/A
Insertions

S

ins_1577:A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N9S
  • NP:R15K
  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:K206E
  • NP:I246V
  • NP:K265R
  • NP:R270K
  • NP:S301G
  • NP:A307P
Deletions
N/A
Insertions
N/A

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