This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PA8V.1

Zambia/LOC_000PA8V.1/2015
M. Kajihara, M. Simuunza, N. Saasa, G. Dautu, A. Mori-Kajihara, Y. Qiu, R. Nakao, Y. Eto, H. Furumoto, B. M. Hang'ombe, Y. Orba, H. Sawa, E. Simulundu, S. Fukushi, S. Morikawa, M. Saijo, J. Arikawa, S. Kabilika, M. Monze, V. Mukonka, A. Mweene, A. Takada & K. Yoshimatsu

Research Center for Zoonosis Control; Kita 20 Nishi 10, Kita-ku, Sapporo, Hokkaido 001-0020

Sample details

Collection date
2015
Earliest release date
2021-05-14
Sampling location
Zambia
Isolate name
ZT15-311

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-05-14
INSDC accession S

Submission details

Submission ID
LC534901.1.S
Submitting group
Date submitted
2026-02-27 15:36:26 UTC
Date released
2026-02-27 15:39:16 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
10
Length S
220 (12.2%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • A309G
  • A311G
  • G330A
  • T348C
  • T387C
  • A393G
  • C411T
  • A423G
  • A441G
  • G444A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K91R
Deletions
N/A
Insertions
N/A

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