This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PA8V.1

Zambia/LOC_000PA8V.1/2015
M. Kajihara, M. Simuunza, N. Saasa, G. Dautu, A. Mori-Kajihara, Y. Qiu, R. Nakao, Y. Eto, H. Furumoto, B. M. Hang'ombe, Y. Orba, H. Sawa, E. Simulundu, S. Fukushi, S. Morikawa, M. Saijo, J. Arikawa, S. Kabilika, M. Monze, V. Mukonka, A. Mweene, A. Takada & K. Yoshimatsu

Research Center for Zoonosis Control; Kita 20 Nishi 10, Kita-ku, Sapporo, Hokkaido 001-0020

Sample details

Collection date
2015
Earliest release date
2021-05-14
Sampling location
Zambia
Isolate name
ZT15-10

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 12:50insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-05-14
INSDC accession S

Submission details

Submission ID
LC534898.1.S
Submitting group
Date submitted
2026-03-05 12:50:45 UTC
Date released
2026-03-05 12:55:19 UTC

Host

Host

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
23
Length S
220 (13.2%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A322G
  • A325G
  • A327G
  • G346A
  • A355G
  • A358C
  • T364C
  • C370T
  • G397A
  • C400T
  • G418A
  • G421A
  • A425G
  • C427T
  • G428A
  • G429A
  • A439G
  • G451A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:K91R
  • NP:T124A
  • NP:G125N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue