This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PA8V.1

Spain/LOC_000PA8V.1/2017-09
N. Busquets, M. Laranjo-Gonzalez, M. Soler, O. Nicolas, R. Rivas, S. Talavera, R. Villalba, E. San Miguel, N. Torner, C. Aranda & S. Napp

IRTA-CReSA, Exotic diseases

Sample details

Collection date
2017-09
Earliest release date
2018-12-16
Sampling location
Spain
Isolate name
AC568

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-23 00:20insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-12-16
NCBI update date
2018-12-16
INSDC accession

Host

Host

Submission details

Submission ID
MH327930.1
Submitting group
Date submitted
2026-02-23 00:20:09 UTC
Date released
2026-02-23 00:30:39 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
193
Length
933 (8.46%)

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • T9204A
  • C9207T
  • G9210A
  • G9216A
  • C9219A
  • C9222G
  • A9225G
  • A9228G
  • G9231T
  • T9234G
  • C9241T
    • Deletions
    N/A
    Insertions
    N/A

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS5

  • NS5:R522K
  • NS5:R527K
  • NS5:R546K
  • NS5:A569S
  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
    • Deletions
    N/A
    Insertions
    N/A

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