This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P9EJ.1

Kazakhstan/LOC_000P9EJ.1/2015
T. Nurmakhanov, Y. Sansyzbaev, P. Deryabin, B. Atshabar, O. Yeskhojayev, A. Vilkova, A. Shevtsov, R. Hewson & B. Atkinson

Public Health England, Research

Sample details

Collection date
2015
Earliest release date
2016-08-29
Sampling location
Kazakhstan (South Kazakhstan oblast)
Isolate name
SK/2015/human

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 15:36insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-08-29
INSDC accession M

Submission details

Submission ID
KX458183.1.M
Submitting group
Date submitted
2026-02-27 15:36:26 UTC
Date released
2026-02-27 15:39:16 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M
629
Total inserted nucs M
1
Length M
5171 (94.7%)
Variant M
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • T116C
  • C118T
  • A127G
  • G132A
  • C133T
  • G135A
  • A139G
  • A143G
  • A144G
  • G145A
  • A149C
  • C151T
  • C155T
  • C158A
  • A159G
  • G166A
  • T178C
  • T181A
Deletions
N/A
Insertions

M segment

ins_5166:A

Amino acid mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:F10L
  • GPC:C15Y
  • GPC:G16D
  • GPC:K19G
  • GPC:N21H
  • GPC:P23S
  • GPC:H24S
  • GPC:N31K
  • GPC:H33N
  • GPC:M35V
  • GPC:D39G
  • GPC:D40G
  • GPC:S41G
  • GPC:P47L
  • GPC:A51T
  • GPC:V54I
  • GPC:P56L
  • GPC:P58S
Deletions
N/A
Insertions
N/A

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