This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8WL.1

Display Name: China/LOC_000P8WL.1/2018
X. Tang

Sample details

Collection date
2018
Collection date (lower bound)
2018-01-01
Collection date (upper bound)
2018-12-31
Earliest release date
2023-01-30
Collection country
China
Isolate name
CA16-18174

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-22 15:57insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Chongqing Medical University, Academy of pediatrics

INSDC

NCBI release date
2023-01-30
NCBI update date
2023-01-30
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
742
Total SNPs
192
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
10.01%
Total stop codons
0

Submission details

Submission ID
OP351794.1
Submitting group
Date submitted
2026-01-22 15:57:03 UTC
Date released
2026-01-22 16:10:46 UTC

Genotype

Genotype
CV-A16

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • C2481G
  • C2483A
  • T2485A
  • C2486A
  • G2489A
  • T2493G
  • G2494A
  • G2495A
  • T2496C
  • T2499C
  • G2500T
  • G2502C
  • C2503T
  • A2508C
  • T2509A
  • C2511A
  • G2517A
  • G2521C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions

    VP1

  • VP1:T13N
  • VP1:S14N
  • VP1:R15Q
  • VP1:G17N
  • VP1:A19S
  • VP1:S22T
  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:T164K
  • VP1:I179V
  • VP1:L183M
    • Deletions
    None
    Insertions
    None

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