This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P8WL.1

Display Name: Spain/LOC_000P8WL.1/2017
A. Moraga Fernandez, L. Royo-Hernandez, M. A. Habela, F. Ruiz Fons, R. Calero-Bernal, C. Gortazar, J. de la Fuente & I. G. Fernandez de Mera

Sample details

Collection date
2017
Collection date (lower bound)
2017-01-01
Collection date (upper bound)
2017-12-31
Earliest release date
2019-09-15
Collection country
Spain
Isolate name
F7.107

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-24 17:17insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Instituto de Investigacion en Recursos Cinegeticos, Sanidad Animal

INSDC

NCBI release date
2019-09-15
INSDC accession S

Host

Host taxon id
Host name scientific
Hyalomma lusitanicum

Alignment and QC metrics S

Length S
212
Total SNPs S
38
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
12.68%
Total stop codons S
0

Submission details

Submission ID
MK297936.1.S
Submitting group
Date submitted
2025-11-24 17:17:01 UTC
Date released
2025-11-24 17:21:46 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:A268C
  • S:G271A
  • S:T274C
  • S:T289C
  • S:C295T
  • S:A298T
  • S:C310T
  • S:C316T
  • S:A322C
  • S:A325G
  • S:T334A
  • S:A337G
  • S:C343T
  • S:G346A
  • S:T364C
  • S:G367A
  • S:C370T
  • S:A379G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:S109N
  • NP:D116E
  • NP:T124S
  • NP:G125N
    • Deletions
    None
    Insertions
    None

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