This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000NBWK.1

Turkey/LOC_000NBWK.1/2009
A. T. Kalaycioglu, R. Durmaz, Y. Uyar, O. Unaldi, E. Aksekili, A. Ozkul, G. Korukluoglu & M. Ertek

Refik Saydam National Public Health Agency, Molecular Microbiology Research and Application Laboratory

Sample details

Collection date
2009
Earliest release date
2010-12-26
Sampling location
Turkey
Isolate name
Samsun 1030-2009

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-30 18:12insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2010-12-26
INSDC accession S segment

Submission details

Submission ID
HQ675003.1.S
Submitting group
Date submitted
2026-03-30 18:11:55 UTC
Date released
2026-03-30 18:13:27 UTC

Host

Host

Clade & Lineage

Closest reference S segment
S1 (OL774851.1)

Files

Annotations

Alignment and QC

Total SNPs S segment
75
Length S segment
522 (28.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T141C
  • C150T
  • G155A
  • T159G
  • T166C
  • C171T
  • A186G
  • T195C
  • C201G
  • A213G
  • T219C
  • C228T
  • G231A
  • T234G
  • G240A
  • G246A
  • A252C
  • T258C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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