This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000NBWK.1

Display Name: Japan/LOC_000NBWK.1/2010
S. Takao & Y. Shimazu

Sample details

Collection date
2010
Collection date (lower bound)
2010-01-01
Collection date (upper bound)
2010-05-15
Earliest release date
2010-05-15
Collection country
Japan
Collection subdivision level 1
Hiroshima
Isolate name
MC007/Hiroshima/2010

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-12 18:23insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Center for Public Health and Environment; Minami-machi 1-6-29, Minami-ku, Hiroshima 734-0007

INSDC

NCBI release date
2010-05-15
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics EV-A71

Length EV-A71
716
Total SNPs EV-A71
127
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
9.67%

Submission details

Submission ID
AB560881.1.EV-A71
Submitting group
Date submitted
2025-11-12 18:23:12 UTC
Date released
2025-11-12 18:25:41 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T2624C
  • T2630C
  • T2636G
  • G2639A
  • C2651T
  • A2669G
  • C2675T
  • T2684C
  • C2687T
  • C2702A
  • G2711A
  • G2714A
  • T2720C
  • T2723C
  • A2729T
  • A2730G
  • G2732A
  • C2738A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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