This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000NBST.1

Turkey/LOC_000NBST.1/2008-06
A. Gargili, K. Midilli, O. Ergonul, S. Ergin, H. G. Alp, Z. Vatansever, S. Iyisan, C. Cerit, G. Yilmaz, K. Altas & A. Estrada-Pena

Cerrahpasa Medical Faculty of Istanbul University, Microbiology and Clinical Microbiology

Sample details

Collection date
2008-06
Earliest release date
2008-11-12
Sampling location
Turkey
Isolate name
Tr-T-06

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-16 16:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2008-11-12
INSDC accession S segment

Host

Host

Submission details

Submission ID
FJ392602.1.S
Submitting group
Date submitted
2026-06-16 16:08:42 UTC
Date released
2026-06-16 16:10:14 UTC

Clade & Lineage

Closest reference S segment
S11 (MK299338.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
24
Total ambiguous nucs S segment
1
Length S segment
449 (26.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MK299338.1 references

Substitutions

S segment

  • C198T
  • A201G
  • T216C
  • A247T
  • A270G
  • T309C
  • A315C
  • C342T
  • A348G
  • C369T
  • C384T
  • A393G
  • T426C
  • T447C
  • A483G
  • T513A
  • G534A
  • G537T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MK299338.1 references

Substitutions

NP

  • NP:T65S
  • NP:E161D
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue