This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000ML05.1

Mali/THB174/2024-07-22
K. Ergunay

Smithsonian Institution, Department of Entomology, Walter Reed Biosystematics Unit

Sample details

Collection date
2024-07-22
Earliest release date
2025-10-22
Sampling location
Mali
Isolate name
THB174

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-10-22
NCBI update date
2025-10-22
INSDC accession

Host

Host

Submission details

Submission ID
PV256528.1
Submitting group
Date submitted
2026-08-12 11:45:31 UTC
Date released
2026-08-12 12:06:35 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
39
Length
951 (8.62%)
Amino Acid Mutations from founder clade
  • NS5:W800C
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G9147A
  • T9156C
  • C9171T
  • A9228G
  • G9261A
  • T9264C
  • T9279C
  • T9285C
  • C9453T
  • T9465C
  • G9534A
  • G9573A
  • A9597G
  • A9606G
  • A9612G
  • A9654G
  • T9678C
  • T9690C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:W800C
Deletions
N/A
Insertions
N/A

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