This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MKDE.1

Display Name: Israel/LOC_000MKDE.1/2014-07-01
N. Zuckerman

Sample details

Collection date
2014-07-01
Collection date (lower bound)
2014-07-01
Collection date (upper bound)
2014-07-01
Earliest release date
2025-08-09
Collection country
Israel
Isolate name
WNV42

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-27 14:17insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Israel Ministry of Health, Central Biology Labratory

INSDC

NCBI release date
2025-08-09
NCBI update date
2025-08-09
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
10949
Total SNPs
448
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
3
Total unknown nucs
0
Total frame shifts
0
Completeness
99.25%
Total stop codons
0

Submission details

Submission ID
PX051445.1
Submitting group
Date submitted
2025-10-27 14:17:35 UTC
Date released
2025-10-27 14:38:45 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C64T
  • T195A
  • C210T
  • T234C
  • C282T
  • G354A
  • C483T
  • G492A
  • G495T
  • T516C
  • A525G
  • C561T
  • A579G
  • C600T
  • T606C
  • A630G
  • T639C
  • C745T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS1

  • NS1:A70S
  • NS1:N147S
  • NS1:V171I

    • NS2B

  • NS2B:V103A
  • NS2B:V120I

    • NS3

  • NS3:P249A
  • NS3:S334A
  • NS3:T356I
  • NS3:V556M

    • NS4A

  • NS4A:A85V

    • NS4B

  • NS4B:E249D

    • env

  • env:I126T
  • env:V159I
  • env:L167F
    • Deletions
    None
    Insertions
    None

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