This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MFM1.1

Austria/LOC_000MFM1.1/2024-09-17
D. M. Florian, S. W. Aberle & J. V. Camp

Medical University of Vienna, Center for Virology

Sample details

Collection date
2024-09-17
Earliest release date
2025-01-08
Sampling location
Austria
Isolate name
Austria/MUW1755409/2024

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 16:06insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-01-08
NCBI update date
2025-01-08
INSDC accession

Host

Host

Submission details

Submission ID
PQ785888.1
Submitting group
Date submitted
2026-03-05 16:06:25 UTC
Date released
2026-03-05 16:25:17 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
295
Total inserted nucs
32
Total deleted nucs
12
Length
1486 (13.3%)
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • T9204A
  • C9207T
  • G9210A
  • G9216A
  • C9219A
  • C9222G
Deletions

10467-10470, 10487-10494
Insertions

ins_10408:TGTATTGAGT, ins_10417:GTTGTAGTGTTTA, ins_10452:AGA, ins_10461:AG, ins_10483:GAT, ins_10501:T

Amino acid mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R522K
  • NS5:R527K
  • NS5:R546K
  • NS5:A569S
  • NS5:R590K
  • NS5:T641G
  • NS5:V740I
  • NS5:G805K
  • NS5:E816A
  • NS5:K837R
  • NS5:A860T
  • NS5:Q869H
  • NS5:A877S
  • NS5:I878V
  • NS5:D881E
  • NS5:K892R
  • NS5:T898I
  • NS5:L899V
Deletions
N/A
Insertions
N/A

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