This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M1T3.1

Display Name: China/LOC_000M1T3.1
M. Saijo, Q. Tang, B. Shimayi, L. Han, Y. Zhang, M. Asiguma, D. Tianshu, A. Maeda, I. Kurane & S. Morikawa

Submission details

Submission ID
AB209937.1.S
Submitting group
Date submitted
2025-07-11 18:53:07 UTC
Date released
2025-07-11 18:53:53 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2025-07-11 18:53insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Department of Virology 1; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011

Alignment and QC metrics S

Completeness S
13.16%
Length S
220
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
34
Total unknown nucs S
0

Sample details

Earliest release date
2006-03-01
Collection subdivision level 1
Xinjiang Uygur Autonomous Region
Collection country
China
Collection date (upper bound)
2006-03-01
Isolate name
XJ01Pt02

Host

Host name scientific
Homo sapiens
Host taxon id

INSDC

INSDC accession S
NCBI release date
2006-03-01

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • S:A322G
  • S:A325G
  • S:A331G
  • S:T334G
  • S:A337G
  • S:G346A
  • S:A349G
  • S:G367A
  • S:C370T
  • S:T382C
  • S:T385C
  • S:T388G
  • S:A394G
  • S:G397A
  • S:C400T
  • S:C403A
  • S:G409T
  • S:G418A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:D116E
  • NP:T124A
  • NP:N150H
    • Deletions
    None
    Insertions
    None

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