This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000M1T3.1

Romania/LOC_000M1T3.1/2019
S. Dinu, I. G. Stancu, A. I. Cotar, C. S. Ceianu, G. V. Pintilie, I. Karpathakis, E. Falcuta, O. Csutak, F. L. Prioteasa & G. V. Tiron

National Military Medical Institute for Research and Development, Molecular Epidemiology for Communicable Diseases Laboratory

Sample details

Collection date
2019
Earliest release date
2024-11-05
Sampling location
Romania
Isolate name
RO_moTV13/2019

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-03 13:47insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-11-05
NCBI update date
2024-11-05
INSDC accession

Host

Host

Submission details

Submission ID
PP533498.1
Submitting group
Date submitted
2026-03-03 13:47:06 UTC
Date released
2026-03-03 14:05:52 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
133
Length
653 (5.92%)
Amino Acid Mutations from founder clade
  • NS5:T728M
Variant
False

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T9405C
  • T9408A
  • T9417C
  • C9430A
  • C9432G
  • G9435A
  • T9438G
  • T9441C
  • T9444C
  • A9447G
  • G9449A
  • C9453T
  • C9456G
  • T9465C
  • A9477G
  • G9486A
  • G9489A
  • T9492C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R590K
  • NS5:T641G
  • NS5:T728M
  • NS5:V740I
Deletions
N/A
Insertions
N/A

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